IL_7NSI_061

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

UAG*CAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSI_061 not in the Motif Atlas

Geometric match to IL_7A0S_030

Geometric discrepancy: 0.2929

The information below is about IL_7A0S_030

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_42997.6

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

26

Unit IDs

7NSI|1|BA|U|502
7NSI|1|BA|A|503
7NSI|1|BA|G|504
*
7NSI|1|BA|C|524
7NSI|1|BA|A|525
7NSI|1|BA|A|526

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BJ

39S ribosomal protein L10, mitochondrial isoform a

Chain BK

39S ribosomal protein L11, mitochondrial isoform a

Chain Bq

39S ribosomal protein L54, mitochondrial