IL_7NSI_083

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

7NSI|1|BA|A|1262

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSI_083 not in the Motif Atlas

Homologous match to IL_7RQB_081

Geometric discrepancy: 0.1056

The information below is about IL_7RQB_081

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_42622.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

33

Unit IDs

7NSI|1|BA|G|1065
7NSI|1|BA|A|1066
*
7NSI|1|BA|U|1261
7NSI|1|BA|A|1262
7NSI|1|BA|C|1263
7NSI|1|BA|C|1264

Current chains

Chain BA

16S rRNA

Nearby chains

Chain Bi

Mitochondrial ribosomal protein L45