IL_7NSI_087
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- UCU*AAAA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSI_087 not in the Motif Atlas
- Geometric match to IL_7RQB_031
- Geometric discrepancy: 0.214
- The information below is about IL_7RQB_031
- Detailed Annotation
- Minor groove platform with extra cWW
- Broad Annotation
- Minor groove platform
- Motif group
- IL_46796.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
7NSI|1|BA|U|1192
7NSI|1|BA|C|1193
7NSI|1|BA|U|1194
*
7NSI|1|BA|A|1208
7NSI|1|BA|A|1209
7NSI|1|BA|A|1210
7NSI|1|BA|A|1211
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B0
- 39S ribosomal protein L27, mitochondrial
- Chain B6
- 39S ribosomal protein L33, mitochondrial
- Chain B8
- 39S ribosomal protein L35, mitochondrial
- Chain BS
- 39S ribosomal protein L18, mitochondrial isoform 1
- Chain Bb
- 39S ribosomal protein L38, mitochondrial
Coloring options: