IL_7NSI_102

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GAUAAU*AUUAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSI_102 not in the Motif Atlas

Geometric match to IL_4QLM_002

Geometric discrepancy: 0.3975

The information below is about IL_4QLM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74322.2

Basepair signature

cWW-tSH-L-R-L-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

7NSI|1|BA|G|1507
7NSI|1|BA|A|1508
7NSI|1|BA|U|1509
7NSI|1|BA|A|1510
7NSI|1|BA|A|1511
7NSI|1|BA|U|1512
*
7NSI|1|BA|A|1534
7NSI|1|BA|U|1535
7NSI|1|BA|U|1536
7NSI|1|BA|A|1537
7NSI|1|BA|A|1538
7NSI|1|BA|C|1539

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B9

Ribosomal protein

Chain BN

39S ribosomal protein L13, mitochondrial

Chain Bx

Mitochondrial ribosomal protein S18A