IL_7NSO_019

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSO_019 not in the Motif Atlas

Homologous match to IL_7RQB_021

Geometric discrepancy: 0.0942

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

7NSO|1|A|U|703
7NSO|1|A|G|704
7NSO|1|A|A|705
7NSO|1|A|A|706
7NSO|1|A|G|707
*
7NSO|1|A|U|724
7NSO|1|A|G|725
7NSO|1|A|G|726
7NSO|1|A|A|727
7NSO|1|A|G|728

Current chains

Chain A

23S rRNA (2903-MER)

Nearby chains

Chain C

50S ribosomal protein L2