IL_7NSO_082

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSO_082 not in the Motif Atlas

Geometric match to IL_6E7L_001

Geometric discrepancy: 0.2015

The information below is about IL_6E7L_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

7NSO|1|A|C|2103
7NSO|1|A|C|2104
7NSO|1|A|U|2105
*
7NSO|1|A|A|2184
7NSO|1|A|U|2185
7NSO|1|A|G|2186

Current chains

Chain A

23S rRNA (2903-MER)

Nearby chains