IL_7NSO_085

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGGA*UCUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSO_085 not in the Motif Atlas

Geometric match to IL_3WBM_002

Geometric discrepancy: 0.3756

The information below is about IL_3WBM_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7NSO|1|A|U|2139
7NSO|1|A|G|2140
7NSO|1|A|G|2141
7NSO|1|A|A|2142
*
7NSO|1|A|U|2149
7NSO|1|A|C|2150
7NSO|1|A|U|2151
7NSO|1|A|G|2152

Current chains

Chain A

23S rRNA (2903-MER)

Nearby chains