IL_7NSO_128

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7NSO|1|a|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSO_128 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1176

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7NSO|1|a|G|147
7NSO|1|a|G|148
7NSO|1|a|A|149
7NSO|1|a|U|150
7NSO|1|a|A|151
7NSO|1|a|A|152
7NSO|1|a|C|153
*
7NSO|1|a|G|168
7NSO|1|a|C|169
7NSO|1|a|U|170
7NSO|1|a|A|171
7NSO|1|a|A|172
7NSO|1|a|U|173
7NSO|1|a|A|174
7NSO|1|a|C|175

Current chains

Chain a

16S rRNA (1540-MER)

Nearby chains

Chain t

30S ribosomal protein S20