IL_7NSO_189

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSO_189 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1022

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7NSO|1|A|U|1851
7NSO|1|A|U|1852
7NSO|1|A|A|1853
7NSO|1|A|A|1854
7NSO|1|A|U|1855
7NSO|1|A|U|1856
7NSO|1|A|G|1857
7NSO|1|A|A|1858
7NSO|1|A|U|1859
7NSO|1|A|G|1860
*
7NSO|1|A|U|1882
7NSO|1|A|U|1883
7NSO|1|A|G|1884
7NSO|1|A|A|1885
7NSO|1|A|U|1886
7NSO|1|A|C|1887
7NSO|1|A|G|1888
7NSO|1|A|A|1889
7NSO|1|A|A|1890
7NSO|1|A|G|1891

Current chains

Chain A

23S rRNA (2903-MER)

Nearby chains