IL_7NSP_024

3D structure

PDB id

7NSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UC*GUUA

Length

6 nucleotides

Bulged bases

7NSP|1|A|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSP_024 not in the Motif Atlas

Homologous match to IL_5J7L_268

Geometric discrepancy: 0.1458

The information below is about IL_5J7L_268

Detailed Annotation

Stack outside cWW

Broad Annotation

No text annotation

Motif group

IL_56987.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

3

Unit IDs

7NSP|1|A|U|847
7NSP|1|A|C|848
*
7NSP|1|A|G|930
7NSP|1|A|U|931
7NSP|1|A|U|932
7NSP|1|A|A|933

Current chains

Chain A

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L30