IL_7NSQ_136

3D structure

PDB id

7NSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSQ_136 not in the Motif Atlas

Geometric match to IL_5J7L_023

Geometric discrepancy: 0.1287

The information below is about IL_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70801.1

Basepair signature

cWW-cWW-L-R-tWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

7NSQ|1|a|G|450
7NSQ|1|a|A|451
7NSQ|1|a|A|452
7NSQ|1|a|G|453
7NSQ|1|a|G|454
7NSQ|1|a|G|455
*
7NSQ|1|a|C|477
7NSQ|1|a|A|478
7NSQ|1|a|U|479
7NSQ|1|a|U|480
7NSQ|1|a|G|481
7NSQ|1|a|A|482
7NSQ|1|a|C|483

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16