IL_7NSQ_180

3D structure

PDB id

7NSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGGU*ACUUAC

Length

11 nucleotides

Bulged bases

7NSQ|1|A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSQ_180 not in the Motif Atlas

Geometric match to IL_7VYX_008

Geometric discrepancy: 0.3247

The information below is about IL_7VYX_008

Detailed Annotation

Partly complementary

Broad Annotation

Partly complementary

Motif group

IL_71154.1

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

10

Unit IDs

7NSQ|1|A|G|880
7NSQ|1|A|G|881
7NSQ|1|A|G|882
7NSQ|1|A|G|883
7NSQ|1|A|U|884
*
7NSQ|1|A|A|892
7NSQ|1|A|C|893
7NSQ|1|A|U|894
7NSQ|1|A|U|895
7NSQ|1|A|A|896
7NSQ|1|A|C|897

Current chains

Chain A

23S rRNA

Nearby chains

Chain v

Transfer RNA; tRNA