IL_7NWG_003
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAUAGCUCAGCGUGUAGAGCAUCAGACUUUUAAUCUGAGGGUCCAG*CCCUGUU
- Length
- 54 nucleotides
- Bulged bases
- 7NWG|1|33|C|16, 7NWG|1|33|G|17, 7NWG|1|33|U|18, 7NWG|1|33|G|19, 7NWG|1|33|G|46
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|33|G|5
7NWG|1|33|G|6
7NWG|1|33|A|7
7NWG|1|33|U|8
7NWG|1|33|A|9
7NWG|1|33|G|10
7NWG|1|33|C|11
7NWG|1|33|U|12
7NWG|1|33|C|13
7NWG|1|33|A|14
7NWG|1|33|G|15
7NWG|1|33|C|16
7NWG|1|33|G|17
7NWG|1|33|U|18
7NWG|1|33|G|19
7NWG|1|33|U|20
7NWG|1|33|A|21
7NWG|1|33|G|22
7NWG|1|33|A|23
7NWG|1|33|G|24
7NWG|1|33|C|25
7NWG|1|33|A|26
7NWG|1|33|U|27
7NWG|1|33|C|28
7NWG|1|33|A|29
7NWG|1|33|G|30
7NWG|1|33|A|31
7NWG|1|33|C|32
7NWG|1|33|U|33
7NWG|1|33|U|34
7NWG|1|33|U|35
7NWG|1|33|U|36
7NWG|1|33|A|37
7NWG|1|33|A|38
7NWG|1|33|U|39
7NWG|1|33|C|40
7NWG|1|33|U|41
7NWG|1|33|G|42
7NWG|1|33|A|43
7NWG|1|33|G|44
7NWG|1|33|G|45
7NWG|1|33|G|46
7NWG|1|33|U|47
7NWG|1|33|C|48
7NWG|1|33|C|49
7NWG|1|33|A|50
7NWG|1|33|G|51
*
7NWG|1|33|C|61
7NWG|1|33|C|62
7NWG|1|33|C|63
7NWG|1|33|U|64
7NWG|1|33|G|65
7NWG|1|33|U|66
7NWG|1|33|U|67
Current chains
- Chain 33
- P/E-Site tRNA
Nearby chains
- Chain 51
- Large subunit ribosomal RNA; LSU rRNA
- Chain A2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Q2
- 40S ribosomal protein uS19
- Chain R2
- Ribosomal protein S16
- Chain o3
- eL42
- Chain v3
- mRNA
- Chain w3
- Ribosomal protein
Coloring options: