3D structure

PDB id
7NWG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
CGAAUC*GAAAUGUG
Length
14 nucleotides
Bulged bases
7NWG|1|51|G|119, 7NWG|1|51|U|150
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NWG|1|51|C|118
7NWG|1|51|G|119
7NWG|1|51|A|120
7NWG|1|51|A|121
7NWG|1|51|U|122
7NWG|1|51|C|123
*
7NWG|1|51|G|146
7NWG|1|51|A|147
7NWG|1|51|A|148
7NWG|1|51|A|149
7NWG|1|51|U|150
7NWG|1|51|G|151
7NWG|1|51|U|152
7NWG|1|51|G|153

Current chains

Chain 51
28S Ribosomal RNA

Nearby chains

Chain 81
5.8S ribosomal RNA; 5.8S rRNA
Chain G3
L7a
Chain N3
Ribosomal protein L15
Chain h3
uL29

Coloring options:

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