IL_7NWG_013

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCGG*CGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NWG_013 not in the Motif Atlas

Geometric match to IL_4V87_185

Geometric discrepancy: 0.3872

The information below is about IL_4V87_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09990.3

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

3

Unit IDs

7NWG|1|51|C|174
7NWG|1|51|C|175
7NWG|1|51|G|176
7NWG|1|51|G|177
*
7NWG|1|51|C|260
7NWG|1|51|G|261
7NWG|1|51|G|262

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain L3

L13

Chain h3

uL29