IL_7NWG_015

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCGG*CGGCG

Length

9 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|C|180
7NWG|1|51|C|181
7NWG|1|51|G|182
7NWG|1|51|G|189
*
7NWG|1|51|C|252
7NWG|1|51|G|253
7NWG|1|51|G|254
7NWG|1|51|C|255
7NWG|1|51|G|256

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain 81

5.8S ribosomal RNA; 5.8S rRNA

Chain L3

L13

Chain h3

uL29

Chain j3

Ribosomal protein L37