IL_7NWG_021
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGAAAC*GUGGAUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_021 not in the Motif Atlas
- Homologous match to IL_5TBW_015
- Geometric discrepancy: 0.1757
- The information below is about IL_5TBW_015
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_66414.7
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7NWG|1|51|G|415
7NWG|1|51|U|416
7NWG|1|51|G|417
7NWG|1|51|A|418
7NWG|1|51|A|419
7NWG|1|51|A|420
7NWG|1|51|C|421
*
7NWG|1|81|G|13
7NWG|1|81|U|14
7NWG|1|81|G|15
7NWG|1|81|G|16
7NWG|1|81|A|17
7NWG|1|81|U|18
7NWG|1|81|C|19
Current chains
- Chain 51
- 28S Ribosomal RNA
- Chain 81
- 5.8S Ribosomal RNA
Nearby chains
- Chain C3
- uL4
- Chain P3
- uL22
- Chain e3
- eL32
Coloring options: