IL_7NWG_040

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGCCACCC*GGGGACGGGGC

Length

19 nucleotides

Bulged bases

7NWG|1|51|A|1222, 7NWG|1|51|C|1231

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|1074
7NWG|1|51|G|1075
7NWG|1|51|C|1076
7NWG|1|51|C|1077
7NWG|1|51|A|1078
7NWG|1|51|C|1079
7NWG|1|51|C|1080
7NWG|1|51|C|1081
*
7NWG|1|51|G|1218
7NWG|1|51|G|1219
7NWG|1|51|G|1220
7NWG|1|51|G|1221
7NWG|1|51|A|1222
7NWG|1|51|C|1231
7NWG|1|51|G|1232
7NWG|1|51|G|1233
7NWG|1|51|G|1234
7NWG|1|51|G|1235
7NWG|1|51|C|1236

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain C3

uL4

Chain E3

60S ribosomal protein L6

Chain F3

uL30

Chain b3

eL29