IL_7NWG_044

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGACUG*CAGUGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|1173
7NWG|1|51|G|1174
7NWG|1|51|A|1175
7NWG|1|51|C|1176
7NWG|1|51|U|1177
7NWG|1|51|G|1178
*
7NWG|1|51|C|1183
7NWG|1|51|A|1184
7NWG|1|51|G|1185
7NWG|1|51|U|1186
7NWG|1|51|G|1187
7NWG|1|51|C|1188

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain 71

5S ribosomal RNA; 5S rRNA

Chain D3

60S ribosomal protein L5

Chain I3

60S ribosomal protein L10