3D structure

PDB id
7NWG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
AAGCGAAUG*CAAACUUU
Length
17 nucleotides
Bulged bases
7NWG|1|51|G|1741
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NWG|1|51|A|1737
7NWG|1|51|A|1738
7NWG|1|51|G|1739
7NWG|1|51|C|1740
7NWG|1|51|G|1741
7NWG|1|51|A|1742
7NWG|1|51|A|1743
7NWG|1|51|U|1744
7NWG|1|51|G|1745
*
7NWG|1|51|C|1785
7NWG|1|51|A|1786
7NWG|1|51|A|1787
7NWG|1|51|A|1788
7NWG|1|51|C|1789
7NWG|1|51|U|1790
7NWG|1|51|U|1791
7NWG|1|51|U|1792

Current chains

Chain 51
28S Ribosomal RNA

Nearby chains

Chain 71
5S ribosomal RNA; 5S rRNA
Chain D3
60S ribosomal protein L5
Chain I3
60S ribosomal protein L10
Chain T3
eL21

Coloring options:

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