IL_7NWG_093

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGAAGUCGG*CUGUCC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|2846
7NWG|1|51|G|2847
7NWG|1|51|G|2848
7NWG|1|51|A|2849
7NWG|1|51|A|2850
7NWG|1|51|G|2851
7NWG|1|51|U|2852
7NWG|1|51|C|2853
7NWG|1|51|G|2854
7NWG|1|51|G|2855
*
7NWG|1|51|C|3837
7NWG|1|51|U|3838
7NWG|1|51|G|3839
7NWG|1|51|U|3840
7NWG|1|51|C|3841
7NWG|1|51|C|3842

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain B3

uL3

Chain V3

eL14

Chain W

60S ribosomal protein L24-like protein