IL_7NWG_098

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCGAAGG*UGUUGACGC

Length

16 nucleotides

Bulged bases

7NWG|1|51|A|3663, 7NWG|1|51|U|3679, 7NWG|1|51|C|3683

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|3659
7NWG|1|51|C|3660
7NWG|1|51|G|3661
7NWG|1|51|A|3662
7NWG|1|51|A|3663
7NWG|1|51|G|3664
7NWG|1|51|G|3665
*
7NWG|1|51|U|3677
7NWG|1|51|G|3678
7NWG|1|51|U|3679
7NWG|1|51|U|3680
7NWG|1|51|G|3681
7NWG|1|51|A|3682
7NWG|1|51|C|3683
7NWG|1|51|G|3684
7NWG|1|51|C|3685

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain A2

Small subunit ribosomal RNA; SSU rRNA

Chain A3

L8

Chain p3

ribosomal protein eL43