IL_7NWG_105
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUGUU*ACAG
- Length
- 9 nucleotides
- Bulged bases
- 7NWG|1|51|U|3914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_105 not in the Motif Atlas
- Geometric match to IL_4WF9_109
- Geometric discrepancy: 0.3115
- The information below is about IL_4WF9_109
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
7NWG|1|51|C|3911
7NWG|1|51|U|3912
7NWG|1|51|G|3913
7NWG|1|51|U|3914
7NWG|1|51|U|3915
*
7NWG|1|51|A|4388
7NWG|1|51|C|4389
7NWG|1|51|A|4390
7NWG|1|51|G|4391
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 1
- Sec61Beta
- Chain C3
- uL4
- Chain a3
- uL15
- Chain b3
- eL29
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