IL_7NWG_118

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUGUGG*CUUUUUG

Length

13 nucleotides

Bulged bases

7NWG|1|51|U|4437

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|U|4403
7NWG|1|51|U|4404
7NWG|1|51|G|4405
7NWG|1|51|U|4406
7NWG|1|51|G|4407
7NWG|1|51|G|4408
*
7NWG|1|51|C|4434
7NWG|1|51|U|4435
7NWG|1|51|U|4436
7NWG|1|51|U|4437
7NWG|1|51|U|4438
7NWG|1|51|U|4439
7NWG|1|51|G|4440

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain B3

uL3

Chain I3

60S ribosomal protein L10

Chain q3

Transfer RNA; tRNA