3D structure

PDB id
7NWG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GAUUAUG*CAGAAUC
Length
14 nucleotides
Bulged bases
7NWG|1|51|A|4708
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NWG|1|51|G|4680
7NWG|1|51|A|4681
7NWG|1|51|U|4682
7NWG|1|51|U|4683
7NWG|1|51|A|4684
7NWG|1|51|U|4685
7NWG|1|51|G|4686
*
7NWG|1|51|C|4704
7NWG|1|51|A|4705
7NWG|1|51|G|4706
7NWG|1|51|A|4707
7NWG|1|51|A|4708
7NWG|1|51|U|4709
7NWG|1|51|C|4710

Current chains

Chain 51
28S Ribosomal RNA

Nearby chains

Chain H3
L9
Chain O3
60S RIBOSOMAL PROTEIN UL13
Chain m3
60S RIBOSOMAL PROTEIN EL40

Coloring options:

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