IL_7NWG_139

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAAACG*CUCGCC

Length

13 nucleotides

Bulged bases

7NWG|1|51|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|4890
7NWG|1|51|G|4891
7NWG|1|51|A|4892
7NWG|1|51|A|4893
7NWG|1|51|A|4894
7NWG|1|51|C|4895
7NWG|1|51|G|4896
*
7NWG|1|51|C|4924
7NWG|1|51|U|4925
7NWG|1|51|C|4926
7NWG|1|51|G|4927
7NWG|1|51|C|4928
7NWG|1|51|C|4929

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain E3

60S ribosomal protein L6

Chain M3

Ribosomal protein L14

Chain O3

60S RIBOSOMAL PROTEIN UL13