IL_7NWG_181
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAG*CGAGGAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_181 not in the Motif Atlas
- Homologous match to IL_8C3A_420
- Geometric discrepancy: 0.277
- The information below is about IL_8C3A_420
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14882.1
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
7NWG|1|A2|G|563
7NWG|1|A2|A|564
7NWG|1|A2|G|565
*
7NWG|1|A2|C|585
7NWG|1|A2|G|586
7NWG|1|A2|A|587
7NWG|1|A2|G|588
7NWG|1|A2|G|589
7NWG|1|A2|A|590
7NWG|1|A2|U|591
7NWG|1|A2|C|592
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain K2
- 40S ribosomal protein S9
- Chain f2
- 40S ribosomal protein S30
Coloring options: