IL_7NWG_182
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AGGGCAAGUC*GCU
- Length
- 13 nucleotides
- Bulged bases
- 7NWG|1|A2|U|607
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_182 not in the Motif Atlas
- Geometric match to IL_7A0S_092
- Geometric discrepancy: 0.2905
- The information below is about IL_7A0S_092
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_10892.1
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 39
Unit IDs
7NWG|1|A2|A|599
7NWG|1|A2|G|600
7NWG|1|A2|G|601
7NWG|1|A2|G|602
7NWG|1|A2|C|603
7NWG|1|A2|A|604
7NWG|1|A2|A|605
7NWG|1|A2|G|606
7NWG|1|A2|U|607
7NWG|1|A2|C|608
*
7NWG|1|A2|G|635
7NWG|1|A2|C|636
7NWG|1|A2|U|637
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain D2
- 40S ribosomal protein S2
- Chain E2
- 40S ribosomal protein S3
- Chain K2
- 40S ribosomal protein S9
- Chain f2
- 40S ribosomal protein S30
- Chain v3
- mRNA
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