IL_7NWG_186

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCCCC*GGGGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|A2|G|754
7NWG|1|A2|C|755
7NWG|1|A2|C|756
7NWG|1|A2|C|757
7NWG|1|A2|C|758
*
7NWG|1|A2|G|786
7NWG|1|A2|G|787
7NWG|1|A2|G|788
7NWG|1|A2|G|789
7NWG|1|A2|C|790
7NWG|1|A2|C|791

Current chains

Chain A2

18S Ribosomal RNA

Nearby chains

Chain H2

40S ribosomal protein S6