IL_7NWG_188
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UUG*CUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_188 not in the Motif Atlas
- Homologous match to IL_4V88_424
- Geometric discrepancy: 0.392
- The information below is about IL_4V88_424
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7NWG|1|A2|U|805
7NWG|1|A2|U|806
7NWG|1|A2|G|807
*
7NWG|1|A2|C|856
7NWG|1|A2|U|857
7NWG|1|A2|A|858
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain F2
- S4
- Chain I2
- ribosomal protein eS7
- Chain M2
- 40S ribosomal protein S11
- Chain X2
- Ribosomal protein S15a
Coloring options: