IL_7NWG_190

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GACC*GGCCAU

Length

10 nucleotides

Bulged bases

7NWG|1|A2|A|913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|A2|G|874
7NWG|1|A2|A|875
7NWG|1|A2|C|876
7NWG|1|A2|C|877
*
7NWG|1|A2|G|909
7NWG|1|A2|G|910
7NWG|1|A2|C|911
7NWG|1|A2|C|912
7NWG|1|A2|A|913
7NWG|1|A2|U|914

Current chains

Chain A2

18S Ribosomal RNA

Nearby chains

Chain I2

ribosomal protein eS7

Chain M2

40S ribosomal protein S11

Chain R3

60S ribosomal protein L19