IL_7NWG_219

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUGCCUACC*GUAACCC

Length

16 nucleotides

Bulged bases

7NWG|1|A2|A|1580, 7NWG|1|A2|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|A2|G|1550
7NWG|1|A2|U|1551
7NWG|1|A2|G|1552
7NWG|1|A2|C|1553
7NWG|1|A2|C|1554
7NWG|1|A2|U|1555
7NWG|1|A2|A|1556
7NWG|1|A2|C|1557
7NWG|1|A2|C|1558
*
7NWG|1|A2|G|1577
7NWG|1|A2|U|1578
7NWG|1|A2|A|1579
7NWG|1|A2|A|1580
7NWG|1|A2|C|1581
7NWG|1|A2|C|1582
7NWG|1|A2|C|1583

Current chains

Chain A2

18S Ribosomal RNA

Nearby chains

Chain E2

40S ribosomal protein S3

Chain L2

40S ribosomal protein S10

Chain U2

S19

Chain V2

40S ribosomal protein S20

Chain e2

uS14