IL_7NWG_224

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUACCGAUUG*UAGAGGAAG

Length

19 nucleotides

Bulged bases

7NWG|1|A2|U|1721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|A2|C|1713
7NWG|1|A2|U|1714
7NWG|1|A2|A|1715
7NWG|1|A2|C|1716
7NWG|1|A2|C|1717
7NWG|1|A2|G|1718
7NWG|1|A2|A|1719
7NWG|1|A2|U|1720
7NWG|1|A2|U|1721
7NWG|1|A2|G|1722
*
7NWG|1|A2|U|1812
7NWG|1|A2|A|1813
7NWG|1|A2|G|1814
7NWG|1|A2|A|1815
7NWG|1|A2|G|1816
7NWG|1|A2|G|1817
7NWG|1|A2|A|1818
7NWG|1|A2|A|1819
7NWG|1|A2|G|1820

Current chains

Chain A2

18S Ribosomal RNA

Nearby chains

Chain 51

Large subunit ribosomal RNA; LSU rRNA

Chain V3

eL14

Chain Y2

Ribosomal protein S23

Chain n3

60s ribosomal protein l41