IL_7NWG_237

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUGGGGUC*GCUACCCAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|439
7NWG|1|51|U|440
7NWG|1|51|G|441
7NWG|1|51|G|442
7NWG|1|51|G|443
7NWG|1|51|G|444
7NWG|1|51|U|445
7NWG|1|51|C|446
*
7NWG|1|51|G|1300
7NWG|1|51|C|1301
7NWG|1|51|U|1302
7NWG|1|51|A|1303
7NWG|1|51|C|1304
7NWG|1|51|C|1305
7NWG|1|51|C|1306
7NWG|1|51|A|1307
7NWG|1|51|C|1308

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain 81

5.8S ribosomal RNA; 5.8S rRNA

Chain O3

60S RIBOSOMAL PROTEIN UL13

Chain e3

eL32

Chain f3

eL33