IL_7NWG_239

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAGGAUUCAAC*GCGCAUUUCCAC

Length

23 nucleotides

Bulged bases

7NWG|1|51|C|685, 7NWG|1|51|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|462
7NWG|1|51|A|463
7NWG|1|51|G|464
7NWG|1|51|G|465
7NWG|1|51|A|466
7NWG|1|51|U|467
7NWG|1|51|U|468
7NWG|1|51|C|469
7NWG|1|51|A|470
7NWG|1|51|A|471
7NWG|1|51|C|472
*
7NWG|1|51|G|682
7NWG|1|51|C|683
7NWG|1|51|G|684
7NWG|1|51|C|685
7NWG|1|51|A|686
7NWG|1|51|U|687
7NWG|1|51|U|688
7NWG|1|51|U|689
7NWG|1|51|C|690
7NWG|1|51|C|691
7NWG|1|51|A|692
7NWG|1|51|C|693

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain E3

60S ribosomal protein L6

Chain r3

eL28