IL_7NWG_243

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGACG*CGAAUCC

Length

12 nucleotides

Bulged bases

7NWG|1|51|A|943

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|721
7NWG|1|51|G|722
7NWG|1|51|A|723
7NWG|1|51|C|724
7NWG|1|51|G|725
*
7NWG|1|51|C|941
7NWG|1|51|G|942
7NWG|1|51|A|943
7NWG|1|51|A|944
7NWG|1|51|U|945
7NWG|1|51|C|946
7NWG|1|51|C|947

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain C3

uL4

Chain E3

60S ribosomal protein L6

Chain F3

uL30

Chain S3

60S ribosomal protein L18a

Chain f3

eL33