IL_7NWG_249
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAAAGAUGGUGAACUAU*AUAGGGGCGAAAGACUAAUCGAACCAUCUAGUAGC
- Length
- 52 nucleotides
- Bulged bases
- 7NWG|1|51|A|1534, 7NWG|1|51|A|1630, 7NWG|1|51|A|1637, 7NWG|1|51|A|1638, 7NWG|1|51|U|1639, 7NWG|1|51|A|1650, 7NWG|1|51|G|1654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|51|G|1522
7NWG|1|51|A|1523
7NWG|1|51|A|1524
7NWG|1|51|A|1525
7NWG|1|51|G|1526
7NWG|1|51|A|1527
7NWG|1|51|U|1528
7NWG|1|51|G|1529
7NWG|1|51|G|1530
7NWG|1|51|U|1531
7NWG|1|51|G|1532
7NWG|1|51|A|1533
7NWG|1|51|A|1534
7NWG|1|51|C|1535
7NWG|1|51|U|1536
7NWG|1|51|A|1537
7NWG|1|51|U|1538
*
7NWG|1|51|A|1621
7NWG|1|51|U|1622
7NWG|1|51|A|1623
7NWG|1|51|G|1624
7NWG|1|51|G|1625
7NWG|1|51|G|1626
7NWG|1|51|G|1627
7NWG|1|51|C|1628
7NWG|1|51|G|1629
7NWG|1|51|A|1630
7NWG|1|51|A|1631
7NWG|1|51|A|1632
7NWG|1|51|G|1633
7NWG|1|51|A|1634
7NWG|1|51|C|1635
7NWG|1|51|U|1636
7NWG|1|51|A|1637
7NWG|1|51|A|1638
7NWG|1|51|U|1639
7NWG|1|51|C|1640
7NWG|1|51|G|1641
7NWG|1|51|A|1642
7NWG|1|51|A|1643
7NWG|1|51|C|1644
7NWG|1|51|C|1645
7NWG|1|51|A|1646
7NWG|1|51|U|1647
7NWG|1|51|C|1648
7NWG|1|51|U|1649
7NWG|1|51|A|1650
7NWG|1|51|G|1651
7NWG|1|51|U|1652
7NWG|1|51|A|1653
7NWG|1|51|G|1654
7NWG|1|51|C|1655
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 1
- Sec61Beta
- Chain A3
- L8
- Chain C3
- uL4
- Chain L3
- L13
- Chain N3
- Ribosomal protein L15
- Chain P3
- uL22
- Chain a3
- uL15
- Chain j3
- Ribosomal protein L37
- Chain l3
- eL39
Coloring options: