IL_7NWG_256

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAGAAG*CCCUUGAAAAUC

Length

18 nucleotides

Bulged bases

7NWG|1|51|C|2739, 7NWG|1|51|U|2740

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|2597
7NWG|1|51|A|2598
7NWG|1|51|G|2599
7NWG|1|51|A|2600
7NWG|1|51|A|2601
7NWG|1|51|G|2602
*
7NWG|1|51|C|2737
7NWG|1|51|C|2738
7NWG|1|51|C|2739
7NWG|1|51|U|2740
7NWG|1|51|U|2741
7NWG|1|51|G|2742
7NWG|1|51|A|2743
7NWG|1|51|A|2744
7NWG|1|51|A|2745
7NWG|1|51|A|2746
7NWG|1|51|U|2747
7NWG|1|51|C|2748

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain A3

L8

Chain g3

60S ribosomal protein L34

Chain p3

ribosomal protein eL43