IL_7NWG_264

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUCUAGUC*GGUGGGGAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|C|3924
7NWG|1|51|U|3925
7NWG|1|51|C|3926
7NWG|1|51|U|3927
7NWG|1|51|A|3928
7NWG|1|51|G|3929
7NWG|1|51|U|3930
7NWG|1|51|C|3931
*
7NWG|1|51|G|4179
7NWG|1|51|G|4180
7NWG|1|51|U|4181
7NWG|1|51|G|4182
7NWG|1|51|G|4183
7NWG|1|51|G|4184
7NWG|1|51|G|4185
7NWG|1|51|A|4186
7NWG|1|51|G|4187

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain 33

Transfer RNA; tRNA

Chain A3

L8

Chain N3

Ribosomal protein L15

Chain o3

eL42