IL_7NWG_272

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGUAUGUGCUUG*CAAUGGGGCGAAG

Length

25 nucleotides

Bulged bases

7NWG|1|51|U|4634, 7NWG|1|51|U|4636, 7NWG|1|51|A|4656, 7NWG|1|51|U|4657

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|U|4632
7NWG|1|51|G|4633
7NWG|1|51|U|4634
7NWG|1|51|A|4635
7NWG|1|51|U|4636
7NWG|1|51|G|4637
7NWG|1|51|U|4638
7NWG|1|51|G|4639
7NWG|1|51|C|4640
7NWG|1|51|U|4641
7NWG|1|51|U|4642
7NWG|1|51|G|4643
*
7NWG|1|51|C|4654
7NWG|1|51|A|4655
7NWG|1|51|A|4656
7NWG|1|51|U|4657
7NWG|1|51|G|4658
7NWG|1|51|G|4659
7NWG|1|51|G|4660
7NWG|1|51|G|4661
7NWG|1|51|C|4662
7NWG|1|51|G|4663
7NWG|1|51|A|4664
7NWG|1|51|A|4665
7NWG|1|51|G|4666

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain B3

uL3

Chain R3

60S ribosomal protein L19

Chain W

60S ribosomal protein L24-like protein

Chain d3

eL31