IL_7NWG_274

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGG*CUCG

Length

7 nucleotides

Bulged bases

7NWG|1|51|C|5054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NWG_274 not in the Motif Atlas

Geometric match to IL_5ML7_010

Geometric discrepancy: 0.2924

The information below is about IL_5ML7_010

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

7NWG|1|51|C|4996
7NWG|1|51|G|4997
7NWG|1|51|G|4998
*
7NWG|1|51|C|5052
7NWG|1|51|U|5053
7NWG|1|51|C|5054
7NWG|1|51|G|5055

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain B3

uL3

Chain d3

eL31