IL_7NWG_275

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGUUUCGUACG*UUGAAAGUCAGCC

Length

24 nucleotides

Bulged bases

7NWG|1|51|G|5041, 7NWG|1|51|G|5049, 7NWG|1|51|C|5050

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|4999
7NWG|1|51|G|5000
7NWG|1|51|U|5001
7NWG|1|51|U|5002
7NWG|1|51|U|5003
7NWG|1|51|C|5004
7NWG|1|51|G|5005
7NWG|1|51|U|5006
7NWG|1|51|A|5007
7NWG|1|51|C|5008
7NWG|1|51|G|5009
*
7NWG|1|51|U|5039
7NWG|1|51|U|5040
7NWG|1|51|G|5041
7NWG|1|51|A|5042
7NWG|1|51|A|5043
7NWG|1|51|A|5044
7NWG|1|51|G|5045
7NWG|1|51|U|5046
7NWG|1|51|C|5047
7NWG|1|51|A|5048
7NWG|1|51|G|5049
7NWG|1|51|C|5050
7NWG|1|51|C|5051

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain B3

uL3

Chain W

60S ribosomal protein L24-like protein

Chain d3

eL31