IL_7NWG_288

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUGAAAAAAUUA*UACCGCAGCUA

Length

23 nucleotides

Bulged bases

7NWG|1|A2|G|852, 7NWG|1|A2|C|853

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|A2|U|805
7NWG|1|A2|U|806
7NWG|1|A2|G|807
7NWG|1|A2|A|808
7NWG|1|A2|A|809
7NWG|1|A2|A|810
7NWG|1|A2|A|811
7NWG|1|A2|A|812
7NWG|1|A2|A|813
7NWG|1|A2|U|814
7NWG|1|A2|U|815
7NWG|1|A2|A|816
*
7NWG|1|A2|U|848
7NWG|1|A2|A|849
7NWG|1|A2|C|850
7NWG|1|A2|C|851
7NWG|1|A2|G|852
7NWG|1|A2|C|853
7NWG|1|A2|A|854
7NWG|1|A2|G|855
7NWG|1|A2|C|856
7NWG|1|A2|U|857
7NWG|1|A2|A|858

Current chains

Chain A2

18S Ribosomal RNA

Nearby chains

Chain F2

S4

Chain I2

ribosomal protein eS7

Chain K2

40S ribosomal protein S9

Chain M2

40S ribosomal protein S11

Chain X2

Ribosomal protein S15a