IL_7NWG_291

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCCGCUAG*CUUGGACCGGC

Length

19 nucleotides

Bulged bases

7NWG|1|A2|G|970

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|A2|G|949
7NWG|1|A2|C|950
7NWG|1|A2|C|951
7NWG|1|A2|G|952
7NWG|1|A2|C|953
7NWG|1|A2|U|954
7NWG|1|A2|A|955
7NWG|1|A2|G|956
*
7NWG|1|A2|C|967
7NWG|1|A2|U|968
7NWG|1|A2|U|969
7NWG|1|A2|G|970
7NWG|1|A2|G|971
7NWG|1|A2|A|972
7NWG|1|A2|C|973
7NWG|1|A2|C|974
7NWG|1|A2|G|975
7NWG|1|A2|G|976
7NWG|1|A2|C|977

Current chains

Chain A2

18S Ribosomal RNA

Nearby chains

Chain 51

Large subunit ribosomal RNA; LSU rRNA

Chain A3

L8

Chain C2

40S ribosomal protein S3a

Chain P2

uS11