IL_7NWG_293

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGAGUAUG*UGAAACU

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|A2|G|1167
7NWG|1|A2|G|1168
7NWG|1|A2|G|1169
7NWG|1|A2|A|1170
7NWG|1|A2|G|1171
7NWG|1|A2|U|1172
7NWG|1|A2|A|1173
7NWG|1|A2|U|1174
7NWG|1|A2|G|1175
*
7NWG|1|A2|U|1186
7NWG|1|A2|G|1187
7NWG|1|A2|A|1188
7NWG|1|A2|A|1189
7NWG|1|A2|A|1190
7NWG|1|A2|C|1191
7NWG|1|A2|U|1192

Current chains

Chain A2

18S Ribosomal RNA

Nearby chains

Chain Y2

Ribosomal protein S23

Chain n3

60s ribosomal protein l41