IL_7NWG_298
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAUGCUA*UAGAGG
- Length
- 13 nucleotides
- Bulged bases
- 7NWG|1|A2|U|1397
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_298 not in the Motif Atlas
- Geometric match to IL_6O5F_001
- Geometric discrepancy: 0.4
- The information below is about IL_6O5F_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
7NWG|1|A2|C|1395
7NWG|1|A2|A|1396
7NWG|1|A2|U|1397
7NWG|1|A2|G|1398
7NWG|1|A2|C|1399
7NWG|1|A2|U|1400
7NWG|1|A2|A|1401
*
7NWG|1|A2|U|1445
7NWG|1|A2|A|1446
7NWG|1|A2|G|1447
7NWG|1|A2|A|1448
7NWG|1|A2|G|1449
7NWG|1|A2|G|1450
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain R2
- Ribosomal protein S16
- Chain S2
- 40S ribosomal protein S17
- Chain V2
- 40S ribosomal protein S20
- Chain h2
- ribosomal protein RACK1
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