3D structure

PDB id
7NWG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
CCCUCAGUAA*UGAACAGGG
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NWG|1|51|C|79
7NWG|1|51|C|80
7NWG|1|51|C|81
7NWG|1|51|U|82
7NWG|1|51|C|83
7NWG|1|51|A|84
7NWG|1|51|G|85
7NWG|1|51|U|86
7NWG|1|51|A|87
7NWG|1|51|A|88
*
7NWG|1|51|U|96
7NWG|1|51|G|97
7NWG|1|51|A|98
7NWG|1|51|A|99
7NWG|1|51|C|100
7NWG|1|51|A|101
7NWG|1|51|G|102
7NWG|1|51|G|103
7NWG|1|51|G|104

Current chains

Chain 51
28S Ribosomal RNA

Nearby chains

Chain L3
L13
Chain N3
Ribosomal protein L15
Chain Q3
L18
Chain a3
uL15

Coloring options:

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