IL_7NWG_311

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

7NWG|1|51|G|1359, 7NWG|1|51|C|1378, 7NWG|1|51|U|1381

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|C|1357
7NWG|1|51|G|1358
7NWG|1|51|G|1359
7NWG|1|51|G|1360
7NWG|1|51|G|1361
*
7NWG|1|51|C|1376
7NWG|1|51|G|1377
7NWG|1|51|C|1378
7NWG|1|51|C|1379
7NWG|1|51|G|1380
7NWG|1|51|U|1381
7NWG|1|51|G|1382

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain C3

uL4

Chain L3

L13

Chain N3

Ribosomal protein L15

Chain a3

uL15