IL_7NWG_315
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGUUGGUUGAUAUAGACAGCAGG*CUGCCGAAUCAACUAGCC
- Length
- 42 nucleotides
- Bulged bases
- 7NWG|1|51|U|1947, 7NWG|1|51|U|1957, 7NWG|1|51|A|1958, 7NWG|1|51|A|1960, 7NWG|1|51|C|1966, 7NWG|1|51|A|1967, 7NWG|1|51|C|2022, 7NWG|1|51|A|2026, 7NWG|1|51|U|2027, 7NWG|1|51|U|2032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|51|G|1946
7NWG|1|51|U|1947
7NWG|1|51|G|1948
7NWG|1|51|U|1949
7NWG|1|51|U|1950
7NWG|1|51|G|1951
7NWG|1|51|G|1952
7NWG|1|51|U|1953
7NWG|1|51|U|1954
7NWG|1|51|G|1955
7NWG|1|51|A|1956
7NWG|1|51|U|1957
7NWG|1|51|A|1958
7NWG|1|51|U|1959
7NWG|1|51|A|1960
7NWG|1|51|G|1961
7NWG|1|51|A|1962
7NWG|1|51|C|1963
7NWG|1|51|A|1964
7NWG|1|51|G|1965
7NWG|1|51|C|1966
7NWG|1|51|A|1967
7NWG|1|51|G|1968
7NWG|1|51|G|1969
*
7NWG|1|51|C|2019
7NWG|1|51|U|2020
7NWG|1|51|G|2021
7NWG|1|51|C|2022
7NWG|1|51|C|2023
7NWG|1|51|G|2024
7NWG|1|51|A|2025
7NWG|1|51|A|2026
7NWG|1|51|U|2027
7NWG|1|51|C|2028
7NWG|1|51|A|2029
7NWG|1|51|A|2030
7NWG|1|51|C|2031
7NWG|1|51|U|2032
7NWG|1|51|A|2033
7NWG|1|51|G|2034
7NWG|1|51|C|2035
7NWG|1|51|C|2036
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 71
- 5S ribosomal RNA; 5S rRNA
- Chain H3
- L9
- Chain I3
- 60S ribosomal protein L10
- Chain S3
- 60S ribosomal protein L18a
- Chain m3
- 60S RIBOSOMAL PROTEIN EL40
- Chain t3
- 60S acidic ribosomal protein P0
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