IL_7NWG_316

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCCUUGAAGCCUAG*CGGGUGGAGC

Length

24 nucleotides

Bulged bases

7NWG|1|51|U|2305, 7NWG|1|51|A|2313

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|2301
7NWG|1|51|C|2302
7NWG|1|51|C|2303
7NWG|1|51|U|2304
7NWG|1|51|U|2305
7NWG|1|51|G|2306
7NWG|1|51|A|2307
7NWG|1|51|A|2308
7NWG|1|51|G|2309
7NWG|1|51|C|2310
7NWG|1|51|C|2311
7NWG|1|51|U|2312
7NWG|1|51|A|2313
7NWG|1|51|G|2314
*
7NWG|1|51|C|2325
7NWG|1|51|G|2326
7NWG|1|51|G|2327
7NWG|1|51|G|2328
7NWG|1|51|U|2329
7NWG|1|51|G|2330
7NWG|1|51|G|2331
7NWG|1|51|A|2332
7NWG|1|51|G|2333
7NWG|1|51|C|2334

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain 81

5.8S ribosomal RNA; 5.8S rRNA

Chain C3

uL4

Chain P3

uL22

Chain Y3

Ribosomal protein L26

Chain e3

eL32